Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CAACTGCAGCTGGGAT
((.((((((((((((......&)))))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_018996
GeneSymbolTNRC6C
Binding site458,474
Score0.962
Seed0
Au0.544
Energy-23.2
Binding len16
Me-5.728
Phylopstem2.6944106666666667
Phylopflank3.851490617500001
Longest consecutive pairings12
Position of longest consecutive pairings4
Pairings in 3prime end2
Position5UTR
2D Structure