Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAATTGCAGCGGCAGCGGCT
..((.(((((.(((((((.((&))..))))))).))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001365536
GeneSymbolSCN9A
Binding site1612,1633
Score0.846
Seed0
Au0.529
Energy-22.1
Binding len21
Me-11.901
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings10
Pairings in 3prime end7
PositionCDS
2D Structure