Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGGCTGGGGATGTTATCACAGCTGCAGTGACTGCAGC
((((((((((((((((.....&.))))))))))...)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_019000
GeneSymbolRETREG1
Binding site1194,1234
Score0.846
Seed1
Au0.456
Energy-21.8
Binding len21
Me-3.938
Phylopstem0.21291640526315783
Phylopflank0.5994248124999999
Longest consecutive pairings10
Position of longest consecutive pairings10
Pairings in 3prime end3
PositionCDS
2D Structure