Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCCCAACGCACAGGAAGCCGAAGGGCAACAAACCAGGGCAGCTGCAGG
((((((((((.(((((..(((&.))).....)))))........)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_019003
GeneSymbolSPIN2A
Binding site149,199
Score0.923
Seed1
Au0.412
Energy-22.6
Binding len33
Me-6.762
Phylopstem4.0414438
Phylopflank3.2391793537499995
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure