Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCTGGGCTCTAAATGAATTACAGGTACAGATGGTATGCTAGGTG
(((((((((((..((((.....&.))))....))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_019004
GeneSymbolANKIB1
Binding site3915,3960
Score1.0
Seed1
Au0.603
Energy-20.7
Binding len21
Me-8.574
Phylopstem0.495366090909091
Phylopflank1.8701025312500004
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure