Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGCAGCCTCCTTCATGTGGTGAGGGGATCACTTCAGCTGCC
..(((((((.((((((((((.&))))))))))..........................))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_019007
GeneSymbolARMCX6
Binding site1489,1533
Score0.846
Seed1
Au0.5
Energy-24.2
Binding len44
Me-6.2
Phylopstem1.5626950000000002
Phylopflank1.3709843425000003
Longest consecutive pairings10
Position of longest consecutive pairings34
Pairings in 3prime end7
Position3UTR
2D Structure