Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCCAGGCTGCAGCTCGCT
..((((((((((((...((((&))))...)))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_019013
GeneSymbolPIMREG
Binding site310,331
Score0.923
Seed1
Au0.353
Energy-23.4
Binding len21
Me-5.925
Phylopstem1.3477556153846153
Phylopflank1.78707185875
Longest consecutive pairings10
Position of longest consecutive pairings4
Pairings in 3prime end5
PositionCDS
2D Structure