Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAATCTGCGTTCTAAAACAGGTC
(((((...((.(((((((((((&))))))))))).))...))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_019014
GeneSymbolPOLR1B
Binding site1340,1363
Score1.0
Seed0
Au0.559
Energy-17.4
Binding len23
Me-12.521
Phylopstem3.780654718181819
Phylopflank4.073378430999999
Longest consecutive pairings11
Position of longest consecutive pairings12
Pairings in 3prime end8
PositionCDS
2D Structure