Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCGGGAGGCGCTGCGGCTGCAGA
((((((((((((.(((.....&.))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_019020
GeneSymbolTBC1D16
Binding site1489,1512
Score0.846
Seed1
Au0.368
Energy-23.5
Binding len17
Me-5.227
Phylopstem-0.7112290416666668
Phylopflank-0.7064564187499998
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure