Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCTGCGGCTCTGCGCCACAGTTGTT
..(((((((.((.((((.(((&.))).)))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_019022
GeneSymbolTMX3
Binding site151,178
Score0.846
Seed1
Au0.485
Energy-17.7
Binding len20
Me-7.489
Phylopstem1.6615558571428575
Phylopflank1.2126634962500003
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure