Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCAGATTGCAGCTGCC
..((((((((((((....(((&)))..)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_019024
GeneSymbolHEATR5B
Binding site1242,1260
Score1.0
Seed1
Au0.544
Energy-22.3
Binding len18
Me-5.925
Phylopstem2.402181583333333
Phylopflank4.93086905
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure