Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCATTCGCATGGCATTCATGGCTGCAACTGATCATAGCAACCAGCTGCGAA
(((((((((((((((((....&.))))))))...........))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_019024
GeneSymbolHEATR5B
Binding site4006,4060
Score0.808
Seed1
Au0.471
Energy-21.8
Binding len30
Me-3.938
Phylopstem4.738471950357145
Phylopflank4.926989979375
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure