Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTCGACGAGCAGCTGTG
..((((((((.((((.(((..&)))))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_019024
GeneSymbolHEATR5B
Binding site3369,3387
Score0.814
Seed1
Au0.544
Energy-20.6
Binding len18
Me-8.015
Phylopstem5.263474
Phylopflank3.411754073749999
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure