Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCCCCTTCACGAGCCGCCACCAAGCAGGCAGG
((((.((((((((((((((((&))))))).........)))))).....)))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_019026
GeneSymbolTMCO1
Binding site604,641
Score0.846
Seed0
Au0.353
Energy-20.9
Binding len37
Me-8.057
Phylopstem-0.07763796333333331
Phylopflank0.012284934999999969
Longest consecutive pairings7
Position of longest consecutive pairings30
Pairings in 3prime end8
PositionCDS
2D Structure