Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGCGCGCCGCGGCTCAGG
(((.((((((((((((((((.&))))))).)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_019029
GeneSymbolCPVL
Binding site67,88
Score0.846
Seed0
Au0.279
Energy-26.6
Binding len21
Me-6.97
Phylopstem-0.27076083529411765
Phylopflank0.013191738249999987
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end7
Position5UTR
2D Structure