Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGAGAAGATAAGGTATGCCAGAGTG
(((((((((((..(((......&.)))..))))))))).)).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_019030
GeneSymbolDHX29
Binding site3942,3967
Score0.846
Seed1
Au0.574
Energy-17.4
Binding len19
Me-8.574
Phylopstem0.8044507249999998
Phylopflank1.9320394537499999
Longest consecutive pairings9
Position of longest consecutive pairings4
Pairings in 3prime end2
PositionCDS
2D Structure