Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGGGCCGCGAAGGATCTTCTGCCACAGCTGCAAC
(((((((((.(((.(.(((((&.)))))).))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_019030
GeneSymbolDHX29
Binding site84,121
Score0.846
Seed1
Au0.397
Energy-23.6
Binding len22
Me-6.27
Phylopstem-0.17503143333333332
Phylopflank0.27069004625000015
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure