Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GCCTCCTTTGGGAAGGTCTGGGGCCGAGGGTCTG
(((((((.(((((((((((..&.)))))))).))).).....)))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_019034
GeneSymbolRHOF
Binding site1679,1713
Score0.923
Seed1
Au0.544
Energy-27.7
Binding len27
Me-6.251
Phylopstem-1.2800048583333334
Phylopflank-0.43775333000000005
Longest consecutive pairings8
Position of longest consecutive pairings18
Pairings in 3prime end6
Position3UTR
2D Structure