Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCATCCACAACCGCACAGAAAGCAAGATTCAAATGGGAACAGCTGTAGT
((((((((((((((((..(((&)))....)))))))))..........................))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_019040
GeneSymbolELP4
Binding site6136,6186
Score0.962
Seed1
Au0.529
Energy-21.0
Binding len50
Me-3.938
Phylopstem2.2362323571428577
Phylopflank2.3618782375
Longest consecutive pairings9
Position of longest consecutive pairings34
Pairings in 3prime end6
Position3UTR
2D Structure