Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTCCCGCGCCCCGCAGCGCC
..((.(((((((.((((((((&)))))...)))..))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_019043
GeneSymbolAPBB1IP
Binding site278,301
Score0.846
Seed0
Au0.265
Energy-20.4
Binding len23
Me-10.365
Phylopstem-0.3828561454545456
Phylopflank0.5280836832499998
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end8
Position5UTR
2D Structure