Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGGACTTGCCTCTCGGTGGACAAACTTGGGGACAGTCAATGCAGCTGCAC
.(((((((((((((.(.((((&.)))).).)))......)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_019043
GeneSymbolAPBB1IP
Binding site1616,1668
Score0.923
Seed1
Au0.471
Energy-20.3
Binding len28
Me-4.529
Phylopstem2.4978570578947363
Phylopflank1.9815059525
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure