Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCCTGAACATCCCCAGCCGTGGCTGTAT
.((((((((((((((...((.&.)).)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_019044
GeneSymbolCCDC93
Binding site1962,1993
Score0.923
Seed1
Au0.529
Energy-24.2
Binding len19
Me-4.026
Phylopstem-0.3941674214285715
Phylopflank-0.33720003499999984
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure