Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTCTGCATACTGCAGCAATGCAT
.(((((((((((((((((((.&))).)))).))))))))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_019046
GeneSymbolANKRD16
Binding site1058,1082
Score0.923
Seed1
Au0.529
Energy-23.0
Binding len24
Me-3.793
Phylopstem-0.14146437826086955
Phylopflank0.2274636524999998
Longest consecutive pairings8
Position of longest consecutive pairings7
Pairings in 3prime end7
PositionCDS
2D Structure