Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&AGCTTGGGGCTGCAGCTGGAGG
((.(((((((((((.((((.(&).)))).))))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_019052
GeneSymbolCCHCR1
Binding site1771,1793
Score1.0
Seed0
Au0.324
Energy-25.5
Binding len22
Me-6.231
Phylopstem1.6354665454545454
Phylopflank1.2429731695
Longest consecutive pairings11
Position of longest consecutive pairings4
Pairings in 3prime end6
PositionCDS
2D Structure