Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGGATGCAGAACTGCAGCTGA
...((((((((((((((((((&))))...))))..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_019052
GeneSymbolCCHCR1
Binding site1622,1646
Score0.846
Seed0
Au0.353
Energy-23.1
Binding len24
Me-6.515
Phylopstem1.3429811347826084
Phylopflank1.642074687
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure