Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCCAGCCAGGTTGCT
..((((((..(((((..((((&)))).))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_019054
GeneSymbolSHLD2
Binding site842,860
Score0.923
Seed1
Au0.632
Energy-18.5
Binding len18
Me-7.489
Phylopstem2.2514819999999998
Phylopflank1.2655914525000003
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure