Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&AGGACTGCAGCA
.....(((((((((.(.....&).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_019054
GeneSymbolSHLD2
Binding site1571,1583
Score0.846
Seed0
Au0.588
Energy-16.3
Binding len12
Me-14.401
Phylopstem2.451950777777778
Phylopflank2.7033620725
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure