Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCCACAGAATGTGACCTGGAGTGTCTGGTGTGCCGGGA
.((((((((((....(((((..&.))))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_019062
GeneSymbolRNF186
Binding site278,316
Score0.923
Seed1
Au0.368
Energy-20.0
Binding len17
Me-10.022
Phylopstem0.31524445000000006
Phylopflank0.04274031874999992
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure