Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAATCGCGGCTCACTGCAAC
((((((((((((((((.....&))))))))))))....)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_019072
GeneSymbolSGTB
Binding site2678,2699
Score0.846
Seed1
Au0.382
Energy-21.6
Binding len21
Me-3.938
Phylopstem-0.2630219999999999
Phylopflank-0.3711163625
Longest consecutive pairings12
Position of longest consecutive pairings9
Pairings in 3prime end3
Position3UTR
2D Structure