Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCCCTACTGCAGTTGA
...((((((((((.(..((((&))))..).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_019079
GeneSymbolL1TD1
Binding site3140,3159
Score0.846
Seed0
Au0.588
Energy-20.2
Binding len19
Me-7.604
Phylopstem0.11990080000000006
Phylopflank-0.10884014250000003
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure