Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCGATGCTGCAGCTGTT
..(((((((((((.....((.&))...))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_019082
GeneSymbolDDX56
Binding site202,219
Score1.0
Seed1
Au0.412
Energy-20.9
Binding len17
Me-6.782
Phylopstem-1.1975501818181817
Phylopflank-0.49107675000000006
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure