Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ATCCAGAAAGGAGTA
.....((((((((((((((...&)))))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001365597
GeneSymbolPRPF40A
Binding site6025,6040
Score0.923
Seed0
Au0.662
Energy-23.7
Binding len15
Me-13.666
Phylopstem-0.6213207714285715
Phylopflank-0.6896144550000001
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure