Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTACTCTTTAAAGGCTGAAGGGGTGGGTGA
((((.((((((((..(((((((&)))))))..........)))))))).)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001365597
GeneSymbolPRPF40A
Binding site4426,4457
Score0.846
Seed0
Au0.574
Energy-23.1
Binding len31
Me-9.649
Phylopstem-1.0035432
Phylopflank0.12092327624999988
Longest consecutive pairings8
Position of longest consecutive pairings6
Pairings in 3prime end7
Position3UTR
2D Structure