Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGGTTTATTTTGGAAGGGACTGTGGCCAGGG
.((((((.((((..........&.)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_019084
GeneSymbolCCNJ
Binding site2304,2335
Score0.923
Seed1
Au0.5
Energy-15.8
Binding len12
Me-9.221
Phylopstem0.5566468333333333
Phylopflank1.2194381762499997
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end0
Position3UTR
2D Structure