Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTTACAACCGGAGTTA
....((((.(((((((((((.&))))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_019084
GeneSymbolCCNJ
Binding site1231,1248
Score0.923
Seed0
Au0.632
Energy-21.8
Binding len17
Me-10.603
Phylopstem2.9606231454545453
Phylopflank3.6096484725
Longest consecutive pairings11
Position of longest consecutive pairings6
Pairings in 3prime end7
PositionCDS
2D Structure