Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTTGCAAGTAGCTGCTGCAT
.((((((.((..((((((((.&))))))))...)).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_019084
GeneSymbolCCNJ
Binding site749,770
Score0.846
Seed1
Au0.574
Energy-21.5
Binding len21
Me-12.279
Phylopstem5.173428250000001
Phylopflank4.860374402500001
Longest consecutive pairings8
Position of longest consecutive pairings13
Pairings in 3prime end7
PositionCDS
2D Structure