Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAGAGTCGGGCGCCAGCTGCAT
.((((((((((.(((...(((&))).....))).))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_019086
GeneSymbolVSIG10
Binding site1230,1254
Score0.846
Seed1
Au0.382
Energy-21.2
Binding len24
Me-7.373
Phylopstem0.9051570909090909
Phylopflank-0.12017765124999998
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure