Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GTGAACGGGAGGAAGGTGACAGGGA
...(((((..(((((((..((&.))..)))))))..))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_019088
GeneSymbolPAF1
Binding site1494,1519
Score0.923
Seed0
Au0.368
Energy-26.1
Binding len20
Me-8.813
Phylopstem4.566914142857143
Phylopflank5.406839157625
Longest consecutive pairings7
Position of longest consecutive pairings8
Pairings in 3prime end6
PositionCDS
2D Structure