Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGGCCAAGGCTGGGGTTC
.(((((..((((((((((...&)))..)))))))))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_019088
GeneSymbolPAF1
Binding site1248,1266
Score0.923
Seed0
Au0.338
Energy-22.3
Binding len18
Me-7.651
Phylopstem3.2785074999999995
Phylopflank5.939641497875
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure