Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGTTGTTGCAGCAGCAGCAGCGGCAGCAGCAGCAGCAGCTGCAGC
((((((((((.(((((.....&.))))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001365597
GeneSymbolPRPF40A
Binding site901,948
Score0.846
Seed1
Au0.426
Energy-24.9
Binding len18
Me-6.762
Phylopstem5.162872999999999
Phylopflank4.685649617500001
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure