Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTGGACCCCGCAGCTGCGT
.(((((((((((..((..(((&)))..)).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_019089
GeneSymbolHES2
Binding site920,940
Score1.0
Seed1
Au0.353
Energy-24.9
Binding len20
Me-5.939
Phylopstem-0.14791871818181818
Phylopflank-0.11082589874999993
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure