Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGTCTCTTTGGTAATAAAACATTTAGAGCATTTACTGTGGGCCAGGTG
(((((((.((((..((((((..&.)))))))))).))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_019091
GeneSymbolPLEKHA3
Binding site9379,9427
Score0.923
Seed1
Au0.603
Energy-19.9
Binding len20
Me-8.397
Phylopstem0.7279578571428571
Phylopflank-0.07614364875000003
Longest consecutive pairings10
Position of longest consecutive pairings9
Pairings in 3prime end6
Position3UTR
2D Structure