Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGGGGCGCCGGAGGGAGCAGCCGGGCTGCGGA
((((((((.(((((((.....&.))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_019091
GeneSymbolPLEKHA3
Binding site84,118
Score0.846
Seed1
Au0.162
Energy-22.8
Binding len17
Me-4.994
Phylopstem0.3467372624999999
Phylopflank0.31599537299999997
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end3
Position5UTR
2D Structure