Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGCCTACTGAGCTGAAACACAG&GTGGTCCCACCACATTTTTTTCAGCATAGTAGCTGGCAT
(((((((((.(((((((.....&.))))))).)))))...)))).
Details
MiRNAhsa-miR-24-2-5p
RefseqIDNM_001365600
GeneSymbolPRPF40A
Binding site5472,5511
Score0.846
Seed1
Au0.574
Energy-19.1
Binding len22
Me-5.18
Phylopstem4.613048666666667
Phylopflank5.06989402625
Longest consecutive pairings7
Position of longest consecutive pairings14
Pairings in 3prime end3
Position3UTR
2D Structure