Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCACATAGTACCCAGGGAGGAGTGATGA
((.(.(((((((((((((((..&.))))))))))))))).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001365600
GeneSymbolPRPF40A
Binding site5991,6019
Score0.923
Seed0
Au0.691
Energy-27.4
Binding len21
Me-9.614
Phylopstem4.453166199999999
Phylopflank5.312307542425
Longest consecutive pairings15
Position of longest consecutive pairings5
Pairings in 3prime end6
Position3UTR
2D Structure