Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ATCCAGAAAGGAGTA
.....((((((((((((((...&)))))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001365600
GeneSymbolPRPF40A
Binding site5911,5926
Score0.846
Seed0
Au0.662
Energy-23.7
Binding len15
Me-13.666
Phylopstem5.335103285714285
Phylopflank5.566636195000001
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure