Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCAGCGCAACCGCTCTGCCTGTCGTGTGCTGCGAG
(((((((.((((((((..((.&))...))))))))..............))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_019096
GeneSymbolGTPBP2
Binding site1478,1513
Score0.923
Seed1
Au0.338
Energy-21.4
Binding len35
Me-6.251
Phylopstem4.130225
Phylopflank5.203834036249999
Longest consecutive pairings8
Position of longest consecutive pairings22
Pairings in 3prime end5
PositionCDS
2D Structure