Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTCAGCTCCGCGCTGCGAG
(((((((.((((..((..(((&)))..)).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_019099
GeneSymbolINKA2
Binding site28,48
Score0.846
Seed1
Au0.191
Energy-20.4
Binding len20
Me-8.397
Phylopstem-0.09372665714285715
Phylopflank-0.04209334083333331
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure