Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTCAGCCTGATGGGGTGTGACAGCTGCAAT
(((((((((((((((..(((.&))))))))...........).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_019099
GeneSymbolINKA2
Binding site2744,2775
Score0.846
Seed1
Au0.471
Energy-20.0
Binding len31
Me-4.171
Phylopstem-0.32827130740740734
Phylopflank-0.2913693225
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure