Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGTAACTTCATCTAAGTCCCCAGATGGGTACAATGGGAGCTGA
...(((((.(.((((((....&.)))))).).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_019101
GeneSymbolAPOM
Binding site639,685
Score0.923
Seed0
Au0.485
Energy-17.9
Binding len16
Me-10.396
Phylopstem1.0242576
Phylopflank0.7401747800000001
Longest consecutive pairings6
Position of longest consecutive pairings9
Pairings in 3prime end4
PositionCDS
2D Structure